Identitas dan Keragaman Genetik Begomovirus yang Berasosiasi dengan Penyakit Keriting pada Tomat Berdasarkan Teknik Polymerase Chain Reaction (PCR)- Restriction Fragment Length Polymorphism (RFLP)

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dc.contributor en-US
dc.creator Santoso, Tri Joko; Balai Besar Penelitian dan Pengembangan Bioteknologi dan Sumberdaya Genetik Pertanian, Jl. Tentara Pelajar 3A, Bogor 16111
dc.creator Hidayat, Sri H.; Departemen Proteksi Tanaman, Fakultas Pertanian Institut Pertanian Bogor, Kampus Darmaga, Bogor 16680
dc.creator Herman, M.; Balai Besar Penelitian dan Pengembangan Bioteknologi dan Sumberdaya Genetik Pertanian, Jl. Tentara Pelajar 3A, Bogor 16111
dc.creator Aswidinnoor, H.; Departemen Agronomi dan Hortikultura, Fakultas Pertanian Institut Pertanian Bogor, Kampus Darmaga, Bogor 16680
dc.creator Sudarsono, Sudarsono; Departemen Agronomi dan Hortikultura, Fakultas Pertanian Institut Pertanian Bogor, Kampus Darmaga, Bogor 16680
dc.date 2016-08-09
dc.date.accessioned 2018-05-02T06:14:48Z
dc.date.available 2018-05-02T06:14:48Z
dc.date.issued 2016-08-09
dc.identifier http://ejurnal.litbang.pertanian.go.id/index.php/ja/article/view/3786
dc.identifier 10.21082/jbio.v4n1.2008.p9-17
dc.identifier.uri http://repository.pertanian.go.id/handle/123456789/407
dc.description Begomoviruses, members of the Geminivirus,are considered as emerging plant viruses. This was due tothe increasing incidences and severities of the diseases in anumber of economically important crops, including tomato.Genetic diversities of the Begomovirus isolates infectingtomato (Lycopersicon esculentum) of several areas in Indonesiawere analyzed by using Polymerase Chain Reaction-Restriction Fragment Length Polymorphism (PCR-RFLP)technique. A 1500 base pairs of PCR fragments amplified byusing degenerate primers for Begomovirus was digestedusing four restriction enzymes, i.e., DraI, EcoRI, RsaI, andPstI. The pattern of RE digested fragments of 8 Begomovirusisolates and the predicted RFLP fragments of the Begomovirusisolates in the GeneBank database were used to determinethe genetic identities and diversities among the isolates.Positive results of the PCR amplifications proved thatdiseased tomato plant samples collected from 8 locations inJava and Sumatra were infected with at least one Begomovirusisolate. The PCR amplification products, which weredigested using the four restriction enzymes indicated thepresence of polimorfisms among the DNA fragments of theBegomovirus isolates. Identifications of the Begomovirusindicated that the Brastagi, Bogor, Sragen, Ketep, and Boyolaliisolates were Tomato Leaf Curl Virus (ToLCV); theisolates from Malang and Blitar isolates were AgeratumYellow Vein Virus (AYVV), while one isolate from Kaliurangwas Tomato Yellow Leaf Curl Virus (TYLCV). Results of thephylogenetic analysis of the 8 Begomovirus isolates basedon Begomoviruses from the DNA database indicated thatthey belonged to three different groups. en-US
dc.format application/pdf
dc.language eng
dc.publisher Balai Besar Penelitian dan Pengembangan Bioteknologi dan Sumber Daya Genetik Pertanian en-US
dc.relation http://ejurnal.litbang.pertanian.go.id/index.php/ja/article/view/3786/3135
dc.rights Copyright (c) 2016 Jurnal AgroBiogen en-US
dc.source 2549-1547
dc.source 1907-1094
dc.source Jurnal AgroBiogen; Vol 4, No 1 (2008): April; 9-17 en-US
dc.title Identitas dan Keragaman Genetik Begomovirus yang Berasosiasi dengan Penyakit Keriting pada Tomat Berdasarkan Teknik Polymerase Chain Reaction (PCR)- Restriction Fragment Length Polymorphism (RFLP) en-US
dc.type info:eu-repo/semantics/article
dc.type info:eu-repo/semantics/publishedVersion
dc.type Peer-reviewed Article en-US


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